python kmeans聚类简单介绍和实现代码

一、k均值聚类的简单介绍假设样本分为c类，每个类均存在一个中心点，通过随机生成c个中

一、k均值聚类的简单介绍

假设样本分为c类，每个类均存在一个中心点，通过随机生成c个中心点进行迭代，计算每个样本点到类中心的距离（可以自定义、常用的是欧式距离）  

将该样本点归入到最短距离所在的类，重新计算聚类中心，进行下次的重新划分样本，最终类中心不改变时，聚类完成   

二、伪代码  

三、python代码实现  

#!/usr/bin/env python 
# coding=utf-8 
 
import numpy as np 
import random 
import matplotlib.pyplot as plt 
 
#data:numpy.array dataset 
#k the number of cluster 
def k_means(data,k): 
 
 #random generate cluster_center 
 sample_num=data.shape[0] 
 center_index=random.sample(range(sample_num),k) 
 cluster_cen=data[center_index,:] 
 
 is_change=1 
 cat=np.zeros(sample_num) 
 
 
 while is_change: 
 is_change=0 
 
 for i in range(sample_num): 
 min_distance=100000 
 min_index=0 
 
 for j in range(k): 
 sub_data=data[i,:]-cluster_cen[j,:] 
 distance=np.inner(sub_data,sub_data) 
 if distance<min_distance: 
 min_distance=distance 
 min_index=j+1 
 
 if cat[i]!=min_index: 
 is_change=1 
 cat[i]=min_index 
 for j in range(k): 
 cluster_cen[j]=np.mean(data[cat==(j+1)],axis=0) 
 
 return cat,cluster_cen 
 
 
if __name__=='__main__': 
 
 #generate data 
 cov=[[1,0],[0,1]] 
 mean1=[1,-1] 
 x1=np.random.multivariate_normal(mean1,cov,200) 
 
 mean2=[5.5,-4.5] 
 x2=np.random.multivariate_normal(mean2,cov,200) 
 
 mean3=[1,4] 
 x3=np.random.multivariate_normal(mean3,cov,200) 
 
 mean4=[6,4.5] 
 x4=np.random.multivariate_normal(mean4,cov,200) 
 
 mean5=[9,0.0] 
 x5=np.random.multivariate_normal(mean5,cov,200) 
 
 X=np.vstack((x1,x2,x3,x4,x5)) 
 
 #data distribution 
 fig1=plt.figure(1) 
 p1=plt.scatter(x1[:,0],x1[:,1],marker='o',color='r',label='x1') 
 p2=plt.scatter(x2[:,0],x2[:,1],marker='+',color='m',label='x2') 
 p3=plt.scatter(x3[:,0],x3[:,1],marker='x',color='b',label='x3') 
 p4=plt.scatter(x4[:,0],x4[:,1],marker='*',color='g',label='x4') 
 p5=plt.scatter(x5[:,0],x4[:,1],marker='+',color='y',label='x5') 
 plt.title('original data') 
 plt.legend(loc='upper right') 
 
 cat,cluster_cen=k_means(X,5) 
 
 print 'the number of cluster 1:',sum(cat==1) 
 print 'the number of cluster 2:',sum(cat==2) 
 print 'the number of cluster 3:',sum(cat==3) 
 print 'the number of cluster 4:',sum(cat==4) 
 print 'the number of cluster 5:',sum(cat==5) 
 
 
 fig2=plt.figure(2) 
 for i,m,lo,label in zip(range(5),['o','+','x','*','+'],['r','m','b','g','y'],['x1','x2','x3','x4','x5']): 
 
 p=plt.scatter(X[cat==(i+1),0],X[cat==(i+1),1],marker=m,color=lo,label=label) 
 plt.legend(loc='upper right') 
 plt.title('the clustering result') 
 plt.show() 

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